PUBLICAÇÕES
2021
NAGAMATSU, SHEILA TIEMI ; COUTOUNÉ, NATALIA ; JOSÉ, JULIANA ; FIAMENGHI, MATEUS BERNABE ; Pereira, Gonçalo Amarante Guimarães ; OLIVEIRA, JULIANA VELASCO DE CASTRO ; CARAZZOLLE, Marcelo Falsarella . Ethanol production process driving changes on industrial strains. FEMS YEAST RESEARCH (ONLINE), v. 21, p. foaa071, 2021.
MANEIRA, CARLA ; BERMEJO, PAMELA MAGALÍ ; Pereira, Gonçalo Amarante Guimarães ; DE MELLO, FELLIPE DA SILVEIRA BEZERRA . Exploring G protein-coupled receptors and yeast surface display strategies for viral detection in baker’s yeast: SARS-CoV-2 as a case study. FEMS YEAST RESEARCH, v. 1, p. foab004, 2021.
2020
RAMOS, SIMONE ; SALAZAR, MARCELA ; NASCIMENTO, LEANDRO ; Carazzolle, Marcelo ; PEREIRA, GONÇALO ; DELFORNO, TIAGO ; NASCIMENTO, MARISTELA ; DE ALELUIA, TIAGO ; CELEGHINI, RENATA ; EFRAIM, PRISCILLA . Influence of pulp on the microbial diversity during cupuassu fermentation. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, v. 318, p. 108465, 2020.
CAMARGO, ANTONIO P ; SOURKOV, VSEVOLOD ; PEREIRA, GONÇALO A G ; CARAZZOLLE, MARCELO F . RNAsamba: neural network-based assessment of the protein-coding potential of RNA sequences. NAR Genomics and Bioinformatics, v. 2, p. lqz024, 2020.
COSTA, PAULO C.S. ; BARSOTTINI, MARIO R.O. ; VIEIRA, MARIA L.L. ; PIRES, BÁRBARA A. ; EVANGELISTA, JOEL S. ; ZERI, ANA C.M. ; NASCIMENTO, ANDREY F.Z. ; SILVA, JAQUELINE S. ; Carazzolle, Marcelo F. ; PEREIRA, GONÇALO A.G. ; SFORÇA, MAURÍCIO L. ; MIRANDA, PAULO C.M.L. ; ROCCO, SILVANA A. . N-Phenylbenzamide derivatives as alternative oxidase inhibitors: Synthesis, molecular properties, 1H-STD NMR, and QSAR. JOURNAL OF MOLECULAR STRUCTURE, v. 1208, p. 127903, 2020.
BARSOTTINI, MARIO R. O. ; COPSEY, ALICE ; YOUNG, LUKE ; BARONI, RENATA M. ; CORDEIRO, ARTUR T. ; Pereira, Gonçalo A. G. ; MOORE, ANTHONY L. . Biochemical characterization and inhibition of the alternative oxidase enzyme from the fungal phytopathogen Moniliophthora perniciosa. Communications Biology, v. 3, p. 1-9, 2020.
LOPES, ALBERTO MOURA MENDES ; FÉLIX DE MÉLO, ALLAN HENRIQUE ; PROCÓPIO, DIELLE PIERROTI ; TEIXEIRA, GLEIDSON SILVA ; Carazzolle, Marcelo F. ; DE CARVALHO, LUCAS MIGUEL ; ADELANTADO, NÚRIA ; PEREIRA, GONÇALO A.G. ; FERRER, PAU ; FILHO, FRANCISCO MAUGERI ; GOLDBECK, ROSANA . Genome sequence of Acremonium strictum AAJ6 strain isolated from the Cerrado biome in Brazil and CAZymes expression in thermotolerant industrial yeast for ethanol production. PROCESS BIOCHEMISTRY, v. 98, p. 139-150, 2020.
BUENO, JOÃO GABRIEL RIBEIRO ; BORELLI, GUILHERME ; CORRÊA, THAMY LÍVIA RIBEIRO ; FIAMENGHI, MATEUS BERNABE ; JOSÉ, JULIANA ; DE CARVALHO, MURILO ; DE OLIVEIRA, LEANDRO CRISTANTE ; Pereira, Gonçalo A. G. ; DOS SANTOS, LEANDRO VIEIRA . Novel xylose transporter Cs4130 expands the sugar uptake repertoire in recombinant Saccharomyces cerevisiae strains at high xylose concentrations. Biotechnology for Biofuels, v. 13, p. 145, 2020.
DE ABREU, LUÍS GUILHERME F. ; GRASSI, MARIA CAROLINA B. ; DE CARVALHO, LUCAS M. ; DA SILVA, JOVANDERSON J.B. ; OLIVEIRA, JULIANA V.C. ; BRESSIANI, JOSÉ A. ; PEREIRA, GONÇALO A.G. . Energy cane vs sugarcane: Watching the race in plant development. INDUSTRIAL CROPS AND PRODUCTS, v. 156, p. 112868, 2020.
2019
DE MELLO, FELLIPE DA SILVEIRA BEZERRA ; CORADINI, ALESSANDRO LUIS VENEGA ; TIZEI, PEDRO AUGUSTO GALVÃO ; CARAZZOLLE, Marcelo Falsarella ; Pereira, Gonçalo Amarante Guimarães ; TEIXEIRA, GLEIDSON SILVA . Static microplate fermentation and automated growth analysis approaches identified a highly-aldehyde resistant Saccharomyces cerevisiae strain. BIOMASS & BIOENERGY, v. 120, p. 49-58, 2019.
GRASSI, M.C.B. ; PEREIRA, G.A.G. . Energy-cane and RenovaBio: Brazilian vectors to boost the development of Biofuels. INDUSTRIAL CROPS AND PRODUCTS, v. 129, p. 201-205, 2019.
SILVA, DESIREÉ S. ; DANTZGER, MIRIAM ; DE ASSIS, MICHELLE A. ; GALLARDO, JÉSSICA C.M. ; TEIXEIRA, GLEIDSON S. ; MISSAWA, SÍLVIA K. ; DOMINGUES, ROMÊNIA R. ; Carazzolle, Marcelo F. ; LUNARDI, INÊS ; LEME, ADRIANA F.P. ; PEREIRA, GONÇALO A.G. ; PARREIRAS, LUCAS S. . Lignocellulolytic characterization and comparative secretome analysis of a Trichoderma erinaceum strain isolated from decaying sugarcane straw. Fungal Biology, v. 998, p. 1-39, 2019.
NASCIMENTO, LEANDRO COSTA ; YANAGUI, KARINA ; JOSE, JULIANA ; CAMARGO, EDUARDO L O ; GRASSI, MARIA CAROLINA B ; CUNHA, CAMILA P ; BRESSIANI, JOSÉ ANTONIO ; CARVALHO, GUILHERME M A ; CARVALHO, CARLOS ROBERTO ; PRADO, PAULA F ; Mieczkowski, Piotr ; PEREIRA, GONÇALO A G ; Carazzolle, Marcelo F . Unraveling the complex genome of using Polyploid Gene Assembler. DNA RESEARCH, v. 1, p. 1-12, 2019.
MORETTI-ALMEIDA, G. ; THOMAZELLA, D.P.T. ; PEREIRA, G.A.G. ; MONTEIRO, G. . Heterologous expression of an alternative oxidase from Moniliophthora perniciosa in Saccharomyces cerevisiae: Antioxidant function and in vivo platform for the study of new drugs against witches? broom disease. FUNGAL GENETICS AND BIOLOGY, v. 126, p. 50-55, 2019.
DE CARVALHO, L.M. ; BORELLI, G. ; CAMARGO, A.P. ; DE ASSIS, M.A. ; DE FERRAZ, S.M.F. ; FIAMENGHI, M.B. ; JOSÉ, J. ; MOFATTO, L.S. ; NAGAMATSU, S.T. ; PERSINOTI, G.F. ; SILVA, N.V. ; VASCONCELOS, A.A. ; PEREIRA, G.A.G. ; Carazzolle, M.F. . Bioinformatics applied to biotechnology: A review towards bioenergy research. BIOMASS & BIOENERGY, v. 123, p. 195-224, 2019.
BORELLI, GUILHERME ; FIAMENGHI, MATEUS BERNABE ; DOS SANTOS, LEANDRO VIEIRA ; CARAZZOLLE, Marcelo Falsarella ; Pereira, Gonçalo Amarante Guimarães ; JOSÉ, JULIANA . Positive selection evidence in xylose-related genes suggests methylglyoxal reductase as a target for the improvement of yeasts? fermentation in industry. Genome Biology and Evolution, v. 1, p. 1-40, 2019.
CUNHA, CAMILA P ; DE ABREU, LUIS GUILHERME F ; GRASSI, MARIA CAROLINA B ; ARICETTI, JULIANA A ; MACHADO, EDUARDO C ; PEREIRA, GONÇALO A G ; OLIVEIRA, JULIANA V C . Metabolic Regulation and Development of Energy Cane Setts upon Auxin Stimulus. PLANT AND CELL PHYSIOLOGY, v. 1, p. 1-10, 2019.
2018
MAGALHÃES, BEATRIZ L. ; GRASSI, MARIA CAROLINA B. ; PEREIRA, GONÇALO A.G. ; BROCCHI, Marcelo . Improved n- butanol production from lignocellulosic hydrolysate by Clostridium strain screening and culture-medium optimization. BIOMASS & BIOENERGY, v. 108, p. 157-166, 2018.
MOLANO, EDDY PATRICIA LOPEZ ; CABRERA, Odalys García ; JOSE, JULIANA ; DO NASCIMENTO, LEANDRO COSTA ; CARAZZOLLE, Marcelo Falsarella ; Teixeira, Paulo José Pereira Lima ; ALVAREZ, JAVIER CORREA ; Tiburcio, Ricardo Augusto ; TOKIMATU FILHO, PAULO MASSANARI ; DE LIMA, GUSTAVO MACHADO ALVARES ; GUIDO, RAFAEL VICTÓRIO CARVALHO ; CORRÊA, THAMY LÍVIA RIBEIRO ; LEME, ADRIANA FRANCO PAES ; Mieczkowski, Piotr ; Pereira, Gonçalo Amarante Guimarães . Ceratocystis cacaofunesta genome analysis reveals a large expansion of extracellular phosphatidylinositol-specific phospholipase-C genes (PI-PLC). BMC GENOMICS, v. 19, p. 58, 2018.
SALES, ANA ISABELA LOPES ; MILANEZ, GUILHERME PAIER ; NASCIMENTO, LEANDRO C. ; DO CARMO, CAMILA PINHEIRO ; DA COSTA, FERNANDA LUZ PAULINO ; Pereira, Gonçalo Amarante Guimarães ; MARTINEZ, ROBERTO ; BROCCHI, Marcelo . Draft Genome Sequences of Three Salmonella enterica Serovar 4,[5],12:i:− Strains and One S. enterica Serovar Typhimurium Strain, Isolated in Brazil. GENOME ANNOUNCEMENTS, v. 6, p. e00488-18., 2018.
FIORIN, GABRIEL LORENCINI ; SANCHÉZ-VALLET, ANDREA ; THOMAZELLA, Daniela Paula de Toledo ; DO PRADO, PAULA FAVORETTI VITAL ; DO NASCIMENTO, LEANDRO COSTA ; FIGUEIRA, Antonio Vargas de Oliveira ; THOMMA, BART P.H.J. ; Pereira, Gonçalo Amarante Guimarães ; Teixeira, Paulo José Pereira Lima . Suppression of Plant Immunity by Fungal Chitinase-like Effectors. CURRENT BIOLOGY, v. 28, p. 1-8, 2018.
GRASSI, M.C.B. ; Carazzolle, M.F. ; NAKAGAWA, B.T. ; FERRARI, A. ; NAGAMATSU, S. ; SANTOS, C.R. ; MURAKAMI, M.T. ; PIROLLA, R.A.S. ; PEREIRA, G.A.G. . New contributions for industrial n-butanol fermentation: An optimized Clostridium strain and the use of xylooligosaccharides as a fermentation additive. BIOMASS & BIOENERGY, v. 119, p. 304-313, 2018.
RODRIGUES-PRAUSE, A. ; Sampaio, N. M. V. ; GUROL, T. M. ; AGUIRRE, G. M. ; SEDAM, H. N. C. ; CHAPMAN, M. J. ; MALC, E. P. ; AJITH, V. P. ; CHAKRABORTY, P. ; Tizei, P. A. G. ; Pereira, G. A. G. ; Mieczkowski, P ; NISHANT, K. T. ; Argueso, J. L. . A Case Study of Genomic Instability in an Industrial Strain of Saccharomyces cerevisiae. G3-Genes Genomes Genetics, v. 8, p. 1-52, 2018.
BAZZO, BÁRBARA REGINA ; DE CARVALHO, LUCAS MIGUEL ; CARAZZOLLE, Marcelo Falsarella ; Pereira, Gonçalo Amarante Guimarães ; COLOMBO, CARLOS AUGUSTO . Development of novel EST-SSR markers in the macaúba palm (Acrocomia aculeata) using transcriptome sequencing and cross-species transferability in Arecaceae species. BMC PLANT BIOLOGY, v. 18, p. 1-10, 2018.
BARSOTTINI, MARIO RO ; PIRES, BÁRBARA A ; VIEIRA, MARIA L ; PEREIRA, JOSÉ GC ; COSTA, PAULO CS ; SANITÁ, JAQUELINE ; CORADINI, ALESSANDRO ; MELLO, FELLIPE ; MARSCHALK, CIDNEI ; SILVA, EDER M ; PASCHOAL, DANIELE ; FIGUEIRA, ANTONIO ; RODRIGUES, FÁBIO HS ; CORDEIRO, ARTUR T ; MIRANDA, PAULO CML ; OLIVEIRA, PAULO SL ; SFORÇA, MAURÍCIO L ; Carazzolle, Marcelo F ; ROCCO, SILVANA A ; PEREIRA, GONÇALO AG . Synthesis and testing of novel alternative oxidase (AOX) inhibitors with antifungal activity against Moniliophthora perniciosa (Stahel), the causal agent of witches? broom disease of cocoa, and other phytopathogens. PEST MANAGEMENT SCIENCE, v. 74, p. 1-9, 2018.
LM, CARVALHO ; GV, MEIRELLES ; GAG, PEREIRA ; MF, CARAZZOLLE . A Novel Method for the Integration of Stochastic Petri Net Simulation and Transcriptomic Data Applied to a Metabolic Pathway. JOURNAL OF COMPUTER SCIENCE AND SYSTEMS BIOLOGY (ONLINE), v. 12, p. 9-14, 2018.
2017
IVAMOTO, SUZANA TIEMI ; Reis, Osvaldo ; DOMINGUES, DOUGLAS SILVA ; DOS SANTOS, TIAGO BENEDITO ; DE OLIVEIRA, FERNANDA FREITAS ; POT, DAVID ; LEROY, THIERRY ; VIEIRA, LUIZ GONZAGA ESTEVES ; CARAZZOLLE, Marcelo Falsarella ; Pereira, Gonçalo Amarante Guimarães ; PEREIRA, LUIZ FILIPE PROTASIO . Transcriptome Analysis of Leaves, Flowers and Fruits Perisperm of Coffea arabica L. Reveals the Differential Expression of Genes Involved in Raffinose Biosynthesis. Plos One, v. 12, p. e0169595, 2017.
CHACÓN-MADRID, KATHERINE ; DE SOUZA PESSOA, GUSTAVO ; SALAZAR, MARCELA M. ; PEREIRA, GONÇALO A.G. ; TOLOTI CARNEIRO, JOSIANE MEIRE ; DE LIMA, TATIANI BRENELLI ; GOZZO, FÁBIO CESAR ; ZEZZI ARRUDA, MARCO AURÉLIO . Evaluation of genetically modified Arabidopsis thaliana through metallomic and enzymatic approaches focusing on mass spectrometry-based platforms. INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, v. 1, p. 1-9, 2017.
BARONI, RENATA M. ; LUO, ZHIPU ; DARWICHE, RABIH ; HUDSPETH, ELISSA M. ; SCHNEITER, ROGER ; Pereira, Gonçalo A. G. ; MONDEGO, JORGE M. C. ; ASOJO, OLUWATOYIN A. . Crystal Structure of MpPR-1i, a SCP/TAPS protein from Moniliophthora perniciosa, the fungus that causes Witches? Broom Disease of Cacao. Scientific Reports, v. 7, p. 7818, 2017.
TEMER, BEATRIZ ; DOS SANTOS, LEANDRO VIEIRA ; NEGRI, VICTOR AUGUSTI ; GALHARDO, JULIANA PIMENTEL ; MAGALHÃES, PEDRO HENRIQUE MELLO ; JOSÉ, JULIANA ; MARSCHALK, CIDNEI ; CORRÊA, THAMY LÍVIA RIBEIRO ; CARAZZOLLE, Marcelo Falsarella ; Pereira, Gonçalo Amarante Guimarães . Conversion of an inactive xylose isomerase into a functional enzyme by co-expression of GroEL-GroES chaperonins in Saccharomyces cerevisiae. BMC BIOTECHNOLOGY, v. 17, p. 1-13, 2017.
DARWICHE, RABIH ; EL ATAB, OLA ; BARONI, RENATA MORO ; TEIXEIRA, PAULO J. P. L. ; MONDEGO, JORGE M. C. ; Pereira, Gonçalo A. G. ; SCHNEITER, ROGER . Plant pathogenesis-related proteins of the cacao fungal pathogen Moniliophthora perniciosa differ in their lipid-binding specificities. JOURNAL OF BIOLOGICAL CHEMISTRY, v. 1, p. jbc.M117.811398, 2017.
Nascimento, L. C. ; SALAZAR, M. M. ; LEPIKSON NETO, Jorge ; CAMARGO, E. L. O. ; PARREIRAS, L. S. ; Pereira, G. A. G. ; CARAZZOLLE, Marcelo Falsarella . EUCANEXT: an integrated database for the exploration of genomic and transcriptomic data from Eucalyptus species. Database-The Journal of Biological Databases and Curation, v. 2017, p. bax079, 2017.
2016
DOS SANTOS, LEANDRO VIEIRA ; DE BARROS GRASSI, MARIA CAROLINA ; GALLARDO, JÉSSICA CAROLINA MEDINA ; PIROLLA, RENAN AUGUSTO SIQUEIRA ; CALDERÓN, LUIGE LLERENA ; DE CARVALHO-NETTO, OSMAR VAZ ; PARREIRAS, LUCAS SALERA ; CAMARGO, EDUARDO LEAL OLIVEIRA ; DREZZA, ANGELA LUZIA ; MISSAWA, Sílvia Kazue ; TEIXEIRA, GLEIDSON SILVA ; LUNARDI, INES ; BRESSIANI, JOSÉ ; Pereira, Gonçalo Amarante Guimarães . Second-Generation Ethanol: The Need is Becoming a Reality. Industrial Biotechnology, v. 12, p. 40-57, 2016.
MOFATTO, LUCIANA SOUTO ; CARNEIRO, FERNANDA DE ARAÚJO ; VIEIRA, NATALIA GOMES ; DUARTE, KAROLINE ESTEFANI ; VIDAL, RAMON OLIVEIRA ; ALEKCEVETCH, JEAN CARLOS ; COTTA, MICHELLE GUITTON ; VERDEIL, JEAN-LUC ; LAPEYRE-MONTES, FABIENNE ; LARTAUD, MARC ; LEROY, THIERRY ; DE BELLIS, FABIEN ; POT, DAVID ; RODRIGUES, GUSTAVO COSTA ; CARAZZOLLE, Marcelo Falsarella ; Pereira, Gonçalo Amarante Guimarães ; ANDRADE, ALAN CARVALHO ; MARRACCINI, PIERRE . Identification of candidate genes for drought tolerance in coffee by high-throughput sequencing in the shoot apex of different Coffea arabica cultivars. BMC Plant Biology (Online), v. 16, p. 1-18, 2016.
DE CARVALHO, MAYRA C. DA C.G. ; NASCIMENTO, LEANDRO COSTA ; DARBEN, LUANA M. ; POLIZEL-PODANOSQUI, ADRIANA M. ; LOPES-CAITAR, VALÉRIA S. ; QI, MINGSHENG ; ROCHA, CAROLINA S. ; CARAZZOLLE, Marcelo Falsarella ; KUWAHARA, MÁRCIA K. ; PEREIRA, GONCALO A. G. ; ABDELNOOR, RICARDO V. ; WHITHAM, STEVEN A. ; MARCELINO-GUIMARÃES, FRANCISMAR C. . Prediction of the in planta P. pachyrhizi secretome and potential effector families. Molecular Plant Pathology, v. 1, p. n/a-n/a, 2016.
SALAZAR, M. M. ; Grandis, A. ; PATTATHIL, S. ; LEPIKSON NETO, J. ; CAMARGO, E. L. O. ; Alves, A. ; Rodrigues, J. C. ; Squina, F. M. ; Franco-Cairo, J. P. L. ; Buckeridge, M. ; Hahn, M. G. ; Pereira, G. A. G. . Eucalyptus Cell Wall Architecture: Clues for Lignocellulosic Biomass Deconstruction. BioEnergy Research, p. 969-979, 2016.
FRANCO CAIRO, JOÃO PAULO L. ; CARAZZOLLE, Marcelo Falsarella ; Leonardo, Flavia C. ; MOFATTO, LUCIANA SOUTO ; BRENELLI, L. B. ; GONCALVES, T. A. ; UCHIMA, CRISTIANE A. ; DOMINGUES, R. R. ; Alvarez, T. M. ; TRAMONTINA, R. ; Vidal, R. O. ; COSTA, Fernando Ferreira ; LEONARDO, A. M. C. ; Leme, A. F. P. ; Pereira, G. A. G. ; Squina, F. M. . Expanding the knowledge on lignocellulolytic and redox enzymes of worker and soldier castes from the lower termite Coptotermes gestroi. Frontiers in Microbiology (Online), v. 7, p. 1-21, 2016.
Santos, L. V. ; CARAZZOLLE, Marcelo Falsarella ; NAGAMATSU, S. T. ; Sampaio, N. M. V. ; Almeida, L. D. ; PIROLLA, RENAN AUGUSTO SIQUEIRA ; BORELLI, G. ; CORRÊA, THAMY LÍVIA RIBEIRO ; Argueso, J. L. ; Pereira, G. A. G. . Unraveling the genetic basis of xylose consumption in engineered Saccharomyces cerevisiae strains. Scientific Reports, v. 6, p. 38676, 2016.
BORELLI, GUILHERME ; JOSÉ, JULIANA ; Teixeira, Paulo José Pereira Lima ; DOS SANTOS, LEANDRO VIEIRA ; Pereira, Gonçalo Amarante Guimarães . De Novo Assembly of Candida sojae and Candida boidinii Genomes, Unexplored Xylose-Consuming Yeasts with Potential for Renewable Biochemical Production. Genome Announcements, v. 4, p. e01551-15, 2016.
MILANEZ, GUILHERME PAIER ; NASCIMENTO, LEANDRO COSTA ; TIRABASSI, ADRIANE HOLTZ ; ZUANAZE, MARCELO ; RODRIGUES, DÁLIA PRAZERES ; Pereira, Gonçalo Amarante Guimarães ; BROCCHI, Marcelo . Whole-Genome Sequence of Salmonella enterica Serovar Enteritidis Phage Type 4, Isolated from a Brazilian Poultry Farm. Genome Announcements, v. 4, p. e00340-16, 2016.
2015
Carvalho Netto, O. V. ; CARAZZOLLE, Marcelo Falsarella ; Mofatto, L. ; TEIXEIRA, P. J. P. L. ; Noronha, M. F. ; Calderón, L. A. L. ; Mieczkowski, P ; Argueso, J. L. ; Pereira, G. A. G. . Saccharomyces cerevisiae transcriptional reprograming due to bacterial contamination during industrial scale bioethanol production. Microbial Cell Factories, v. 14, p. 1-26, 2015.
PEREIRA, JORGE F. ; ARAÚJO, ELZA F. ; BROMMONSCHENKEL, SÉRGIO H. ; QUEIROZ, CASLEY B. ; Costa, Gustavo G. L. ; Carazzolle, Marcelo F. ; Pereira, Gonçalo A. G. ; QUEIROZ, MARISA V. . MpSaci is a widespread gypsy-Ty3 retrotransposon highly represented by non-autonomous copies in the Moniliophthora perniciosa genome. Current Genetics, v. 1, p. 1-23, 2015.
Teixeira, Paulo José Pereira Lima ; THOMAZELLA, Daniela Paula de Toledo ; Pereira, Gonçalo Amarante Guimarães. Time for Chocolate: Current Understanding and New Perspectives on Cacao Witches? Broom Disease Research. PLoS Pathogens (Online), v. 11, p. e1005130, 2015.
FRANCO, SULAMITA DE FREITAS ; BARONI, RENATA MORO ; CARAZZOLLE, Marcelo Falsarella ; Teixeira, Paulo José Pereira Lima ; Reis, Osvaldo ; Pereira, Gonçalo Amarante Guimarães ; Mondego, Jorge Maurício Costa . Genomic analyses and expression evaluation of thaumatin-like gene family in the cacao fungal pathogen Moniliophthora perniciosa. Biochemical and Biophysical Research Communications (Print), v. 466, p. 629-636, 2015.
YUYAMA, PRISCILA MARY ; REIS JÚNIOR, OSVALDO ; IVAMOTO, SUZANA TIEMI ; DOMINGUES, DOUGLAS SILVA ; CARAZZOLLE, Marcelo Falsarella ; Pereira, Gonçalo Amarante Guimarães ; CHARMETANT, PIERRE ; LEROY, THIERRY ; PEREIRA, LUIZ FILIPE PROTASIO . Transcriptome analysis in Coffea eugenioides, an Arabica coffee ancestor, reveals differentially expressed genes in leaves and fruits. Molecular Genetics and Genomics (Print), v. 291, p. 323-336, 2015.
BARAU, J. ; Grandis, A. ; CARVALHO, V. M. D. A. ; Teixeira, G. S. ; ZAPAROLI, G. H. A. ; DO RIO, M. C. S. ; RINCONES, J. ; BUCKERIDGE, M. S. ; Pereira, G. A. G. . Apoplastic and intracellular plant sugars regulate developmental transitions in witches’ broom disease of cacao. Journal of Experimental Botany, v. 66, p. 1325-1337, 2015
CORRÊA, THAMY LÍVIA RIBEIRO ; DOS SANTOS, LEANDRO VIEIRA ; Pereira, Gonçalo Amarante Guimarães. AA9 and AA10: from enigmatic to essential enzymes. Applied Microbiology and Biotechnology, v. 100, p. 9-16, 2015.
2014
MACIEL, BRUNA C. M. ; BARBOSA, HERBERT S. ; PESSÔA, GUSTAVO S. ; SALAZAR, MARCELA M. ; Pereira, Gonçalo A. G. ; GONÇALVES, DANIELI C. ; RAMOS, CARLOS H. ; ARRUDA, MARCO A. Z. . Comparative proteomics and metallomics studies in Arabidopsis thaliana leaf tissues: evaluation of the selenium addition in transgenic through chaperone Hsp90 gene and non-transgenic plants using two-dimensional difference gel electrophoresis and laser ab. Proteomics (Weinheim. Print), v. 14, p. n/a-n/a, 2014.
MEINHARDT, Lyndel W ; COSTA, GUSTAVO GILSON ; Thomazella, Daniela PT ; TEIXEIRA, PAULO JOSÉ ; CARAZZOLLE, Marcelo Falsarella ; SCHUSTER, STEPHAN C ; CARLSON, JOHN E ; Guiltinan, Mark J ; Mieczkowski, Piotr ; FARMER, ANDREW ; RAMARAJ, THIRUVARANGAN ; CROZIER, JAYNE ; DAVIS, ROBERT E ; SHAO, JONATHAN ; MELNICK, RACHEL L ; PEREIRA, GONÇALO AG ; Bailey, Bryan A . Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases. BMC Genomics, v. 15, p. 164, 2014.
CARAZZOLLE, Marcelo Falsarella ; DE CARVALHO, LUCAS MIGUEL ; SLEPICKA, HUGO HENRIQUE ; VIDAL, RAMON OLIVEIRA ; Pereira, Gonçalo Amarante Guimarães ; KOBARG, JÖRG ; VAZ MEIRELLES, GABRIELA . IIS – Integrated Interactome System: A Web-Based Platform for the Annotation, Analysis and Visualization of Protein-Metabolite-Gene-Drug Interactions by Integrating a Variety of Data Sources and Tools. Plos One, v. 9, p. e100385, 2014.
CAMARGO, E. L. O. ; Nascimento, L. C. ; Soler, M. ; SALAZAR, M. M. ; LEPIKSON NETO, J. ; Marques, W. L. ; Alves, A. ; TEIXEIRA, P. J. P. L. ; Mieczkowski, P ; CARAZZOLLE, Marcelo Falsarella ; Martinez, Y. ; DECKMANN, Ana Carolina ; Rodrigues, J. C. ; Grima-Pettenati, J. ; Pereira, G. A. G. . Contrasting nitrogen fertilization treatments impact xylem gene expression and secondary cell wall lignification in Eucalyptus. BMC Plant Biology (Online), v. 14, p. 256, 2014.
TEIXEIRA, P. J. P. L. ; THOMAZELLA, Daniela Paula de Toledo ; Junior, O. R. ; Prado, P. F. V. ; RIO, M. C. S. DO ; Fiorin, G. L. ; COSTA, G. G. L. ; Negri, V. A. ; MONDEGO, J. M. C. ; Mieczkowski, P ; Pereira, G. A. G. . High-resolution transcript profiling of the atypical biotrophic interaction between Theobroma cacao and the fungal pathogen Moniliophthora perniciosa. The Plant Cell, v. 1, p. e130807, 2014.
Carvalho Netto, O. V. ; Bressiani, J. A. ; Fiori, C. S. ; SORIANO, H. L. ; SANTOS, J. M. ; BARBOSA, G. V. S. ; XAVIER, M. A. ; LANDELL, M. G. A. ; Pereira, G. A. G. . The potential of the energy cane as the main biomass crop for the cellulosic industry. Chemical and Biological Technologies in Agriculture, v. 2196-5641, p. 1-20, 2014.
LEPIKSON NETO, J. ; Nascimento, L. C. ; SALAZAR, M. M. ; CAMARGO, E. L. O. ; Franco-Cairo, J. P. L. ; TEIXEIRA, P. J. P. L. ; Marques, W. L. ; Squina, F. M. ; Mieczkowski, P ; DECKMANN, Ana Carolina ; Pereira, G. A. G. . Flavonoid supplementation affects the expression of genes involved in cell wall formation and lignification metabolism and increases sugar content and saccharification in the fast-growing eucalyptus hybrid E. urophylla x E. grandis. BMC Plant Biology (Online), v. 14, p. 301, 2014.
RAMOS, SIMONE N.M. ; SALAZAR, MARCELA M. ; PEREIRA, GONÇALO A.G. ; EFRAIM, PRISCILLA . Plant and metagenomic DNA extraction of mucilaginous seeds. MethodsX, v. 1, p. 225-228, 2014.
CEITA, Geruza de Oliveira ; VILAS-BOAS, LAURIVAL ANTÔNIO ; CASTILHO, MARCELO SANTOS ; CARAZZOLLE, Marcelo Falsarella ; PIROVANI, Carlos Priminho ; Selbach-Schnadelbach, Alessandra ; GRAMACHO, Karina Peres ; RAMOS, PABLO IVAN PEREIRA ; BARBOSA, LUCIANA VEIGA ; Pereira, Gonçalo Amarante Guimarães ; Góes-Neto, Aristóteles . Analysis of the ergosterol biosynthesis pathway cloning, molecular characterization and phylogeny of lanosterol 14α-demethylase (ERG11) gene of Moniliophthora perniciosa. Genetics and Molecular Biology (Impresso), v. 1, p. 1-13, 2014.
2013
Marques, W. L. ; SALAZAR, M. M. ; LEPIKSON NETO, Jorge ; CAMARGO, E. L. O. ; TIBURCIO, R. A. ; Nascimento, L. C. ; Pereira, G. A. G. . Identification of four Eucalyptus genes potentially involved in cell wall biosynthesis and evolutionarily related to SHINE transcription factors. Plant Growth Regulation (Print), v. 1, p. 1-5, 2013.
AMBROZIO, A. B. ; Nascimento, L. C. ; OLIVEIRA, B. V. DE ; TEIXEIRA, P. J. P. L. ; TIBURCIO, R. A. ; THOMAZELLA, Daniela Paula de Toledo ; Leme, A. F. P. ; CARAZZOLLE, Marcelo Falsarella ; Vidal, R. O. ; Mieczkowski, P ; MEINHARDT, Lyndel Wayne ; Pereira, G. A. G. ; CABRERA, Odalys García . Global analyses of Ceratocystis cacaofunesta mitochondria: from genome to proteome. BMC Genomics, v. 14, p. 91, 2013.
LEPIKSON NETO, J. ; Alves, A. ; Simões, R. ; DECKMANN, Ana Carolina ; CAMARGO, E. L. O. ; SALAZAR, M. M. ; RIO, M. C. S. DO ; Nascimento, L. C. ; Pereira, G. A. G. ; Rodrigues, J. C. . Flavonoid supplementation reduces the extractive content and increases the syringyl/guaiacyl ratio in Eucalyptus grandis x Eucalyptus urophylla hybrid trees. Bioresources (Raleigh, N.C), v. 8, p. 1747-1757, 2013.
SALAZAR, M. M. ; Nascimento, L. C. ; CAMARGO, E. L. O. ; Gonçalves, D. ; LEPIKSON NETO, J. ; Marques, W. L. ; TEIXEIRA, P. J. P. L. ; Mieczkowski, P ; MONDEGO, J. M. C. ; CARAZZOLLE, Marcelo Falsarella ; DECKMANN, Ana Carolina ; Pereira, G. A. G. . Xylem transcription profiles indicate potential metabolic responses for economically relevant characteristics of Eucalyptus species. BMC Genomics, v. 14, p. 201, 2013.
TEIXEIRA, P. J. P. L. ; COSTA, G. G. L. ; Fiorin, G. L. ; MONDEGO, J. M. C. ; Pereira, G. A. G. . Novel Receptor-Like Kinases in Cacao Contain PR-1 Extracellular Domains. Molecular Plant Pathology, v. 1, p. 1-8, 2013.
Rojas, T. C. G. ; MALUTA, R. P. ; PARIZZI, L. P. ; KOENIGKAN, L. V. ; Yang, J. ; Yu, J. ; Pereira, G. A. G. ; Dias da Silveira, W. . Genome Sequences of Avian Pathogenic Escherichia coli Strains Isolated from Brazilian Commercial Poultry. Genome Announcements, v. 1, p. e00110-13-e00110-13, 2013.
Goldbeck, R. ; Andrade, C. C. P. ; Ramos, M. M. ; Pereira, G. A. G. ; Maugeri Filho, F. . Identification and characterization of cellulases produced by Acremonium strictum isolated from Brazilian biome. International Research Journal of Microbiology (IRJM), v. 4, p. 135-146, 2013.
REAL, F. ; Vidal, R. O. ; Carazzolle, M. F. ; MONDEGO, J. M. C. ; COSTA, G. G. L. ; Herai, R. H. ; WURTELE, M. ; DE CARVALHO, L. M. ; E FERREIRA, R. C. ; MORTARA, R. A. ; BARBIERI, C. L. ; MIECZKOWSKI, P. ; DA SILVEIRA, J. F. ; BRIONES, M. R. D. S. ; Pereira, G. A. G. ; Bahia, D. . The Genome Sequence of Leishmania (Leishmania) amazonensis: Functional Annotation and Extended Analysis of Gene Models. DNA Research, v. 1, p. 1-15, 2013.
Barsottini, Mario Ramos de Oliveira ; de Oliveira, Juliana Ferreira ; ADAMOSKI, DOUGLAS ; Teixeira, Paulo José Pereira Lima ; DO PRADO, PAULA FAVORETTI VITAL ; TIEZZI, HENRIQUE DE OLIVEIRA ; SFORÇA, MAURICIO LUIS ; CASSAGO, ALEXANDRE ; PORTUGAL, RODRIGO VILLARES ; DE OLIVEIRA, PAULO SÉRGIO LOPES ; ZERI, ANA CAROLINA DE MATTOS ; Dias, Sandra Martha Gomes ; PEREIRA, GONÇALO AMARANTE GUIMARAES ; Ambrosio, Andre Luis Berteli . Functional diversification of cerato-platanins in Moniliophthora perniciosa as seen by differential expression and protein function specialization. Molecular Plant-Microbe Interactions, v. 26, p. 1281-1293, 2013.
FRANCO CAIRO, JOÃO PAULO L. ; OLIVEIRA, LEANDRO C. ; UCHIMA, CRISTIANE A. ; Alvarez, Thabata M. ; CITADINI, ANA PAULA DA S. ; COTA, JÚNIO ; LEONARDO, FLÁVIA COSTA ; COSTA-LEONARDO, ANA M. ; Carazzolle, Marcelo F. ; LEITE, VITOR B.P. ; COSTA, FERNANDO F. ; PEREIRA, GONÇALO A.G. ; SQUINA, FABIO M. . Deciphering the Synergism of Endogenous Glycoside Hydrolase Families 1 and 9 from Coptotermes gestroi. Insect Biochemistry and Molecular Biology, v. 43, p. 970-981, 2013.
Carvalho Netto, O. V. ; CARAZZOLLE, Marcelo Falsarella ; Rodrigues, A. ; Bragança, W. O. ; Argueso, J. L. ; COSTA, G. G. L. ; Pereira, G. A. G. . A simple and effective set of PCR-based molecular markers for the monitoring of the Saccharomyces cerevisiae cell population during bioethanol fermentation. Journal of Biotechnology, v. 168, p. 701-709, 2013.
Lopes, F. R. ; Jjingo, D. ; SILVA, C. R. M. ; ANDRADE, A. C. ; Marraccini, P. ; TEIXEIRA, J. B. ; CARAZZOLLE, Marcelo Falsarella ; Pereira, G. A. G. ; PEREIRA, L. F. P. ; VANZELA, A. L. ; Wang, L. ; Jordan, K. ; Carareto, C. M. A. . Transcriptional activity, chromosomal distribution and expression effects of transposable elements in Coffea genomes. Plos One, v. 8, p. e78931, 2013.
GOLDBECK, ROSANA ; RAMOS, MAYLA M. ; PEREIRA, GONÇALO A.G. ; MAUGERI-FILHO, FRANCISCO . Cellulase production from a new strain Acremonium strictum isolated from the Brazilian Biome using different substrates. Bioresource Technology, v. 128, p. 797-803, 2013.
PACHECO, ALESSANDRA GOMES MARQUES ; CASTILHO, MARCELO SANTOS ; LUCCHESE, ANGÉLICA MARIA ; PEREIRA, GONÇALO ; TARANTO, ALEX GUTTERRES . Estudos de Modelagem Comparativa da lanosterol 14-alfa demetilase de Moniliophthora perniciosa. BBR – Biochemistry and Biotechnology Reports, v. 2, p. 8-14, 2013.
BAILEY, BRYAN A. ; CROZIER, JAYNE ; SICHER, RICHARD C. ; STREM, MARY D. ; MELNICK, RACHEL ; Carazzolle, Marcelo F. ; COSTA, GUSTAVO G.L. ; PEREIRA, GONÇALO A.G. ; ZHANG, DAPENG ; MAXIMOVA, SIELA ; GUILTINAN, MARK ; MEINHARDT, LYNDEL . Dynamic changes in pod and fungal physiology associated with the shift from biotrophy to necrotrophy during the infection of Theobroma cacao by Moniliophthora roreri. Physiological and Molecular Plant Pathology, v. 81, p. 84-96, 2013.
2012
Soares-Cavalcanti, N. M. ; Belarmino, L. C. ; Kido, E. A. ; Pandolfi, V. ; Marcelino-Guimarães, F. C. ; Rodrigues, F. ; PEREIRA, G.A. G. ; Benko-Iseppon, A. M. . Overall picture of expressed Heat Shock Factors in Glycine max,Lotus japonicus and Medicago truncatula. Genetics and Molecular Biology (Impresso), v. 35, p. 247-259, 2012.
Nascimento, L. C. ; COSTA, G. G. L. ; Binneck, E, A. ; PEREIRA, G.A. G. ; CARAZZOLLE, Marcelo Falsarella . A web-based bioinformatics interface applied to the GENOSOJA Project: Databases and pipelines. Genetics and Molecular Biology (Impresso), v. 35, p. 203-211, 2012.
Vidal, R. O. ; Nascimento, L. C. ; MONDEGO, J. M. C. ; PEREIRA, G.A. G. ; CARAZZOLLE, Marcelo Falsarella . Identification of SNPs in RNA-seq data of two cultivars of Glycine max (soybean) differing in drought resistance. Genetics and Molecular Biology (Impresso), v. 35, p. 331-334, 2012.
Goldbeck, R. ; Andrade, C. C. P. ; PEREIRA, G.A. G. ; Maugeri Filho, F. . Screening and identification of cellulase producing yeast-like from Brazil Biome. African Journal of Biotechnology, v. 11, p. 11595-11603, 2012.
Ramos, V. da S. ; Garcia, Odalys ; CAMARGO, E. L. O. ; AMBROZIO, A. B. ; Vidal, Ramon O ; SILVA, D. S. ; GUIMARAES, L. ; Marangoni, S. ; Parra, J. R. ; PEREIRA, G.A. G. ; MACEDO, M. L. R. . Molecular cloning and insecticidal effect of Inga laurina trypsin inhibitor on 4 Diatraea saccharalis and Heliothis virescens. Comparative Biochemistry and Physiology. C. Toxicology & Pharmacology, v. 156, p. 148-158, 2012.
TEIXEIRA, P. J. P. L. ; THOMAZELLA, Daniela Paula de Toledo ; Vidal, R. O. ; Prado, P. F. V. ; Reis, Osvaldo ; Baroni, R. M. ; FRANCO, S. DE F. ; Mieczkowski, P ; PEREIRA, G.A. G. ; MONDEGO, J. M. C. . The fungal pathogen Moniliophthora perniciosa has genes similar to plant PR-1 that are highly expressed during its interaction with cacao. Plos One, v. 7, p. e45929, 2012.
OLIVEIRA, B. V. DE ; Teixeira, G. S. ; Junior, O. R. ; BARAU, J. G. ; TEIXEIRA, P. J. P. L. ; RIO, M. C. S. DO ; DOMINGUES, R. R. ; MEINHARDT, Lyndel Wayne ; Leme, A. F. P. ; RINCONES, Johana ; PEREIRA, G.A. G. . A potential role for an extracellular methanol oxidase secreted by Moniliophthora perniciosa in Witches’ broom disease in cacao. Fungal Genetics and Biology (Print), v. 49, p. 922-932, 2012.
Pita, W. B. ; Leite, F. C. B. ; Liberal, A. T. S. ; Pereira, L. F. ; CARAZZOLLE, Marcelo Falsarella ; PEREIRA, G.A. G. ; MORAIS JUNIOR, M. A. . A new set of reference genes for RT-qPCR assays in the yeast. Canadian Journal of Microbiology (Online), v. 58, p. 1362-1367, 2012.
PARIZZI, L. P. ; GRASSI, M. C. B. ; Calderón, L. A. L. ; CARAZZOLLE, Marcelo Falsarella ; QUEIROZ, V. L. ; Lunardi, I. ; ZEIDLER, A. F. B. ; TEIXEIRA, P. J. P. L. ; Mieczkowski, P ; RINCONES, Johana ; PEREIRA, G.A. G. . The genome sequence of Propionibacterium acidipropionici provides insights into its biotechnological and industrial potential. BMC Genomics, v. 13, p. 562-582, 2012.
LACAPE, JEAN-MARC ; CLAVERIE, MICHEL ; VIDAL, RAMON O. ; Carazzolle, Marcelo F. ; Guimarães Pereira, Gonçalo A. ; RUIZ, MANUEL ; PRÉ, MARTIAL ; LLEWELLYN, DANNY ; AL-GHAZI, YVES ; JACOBS, JOHN ; DEREEPER, ALEXIS ; HUGUET, STÉPHANIE ; GIBAND, MARC ; LANAUD, CLAIRE . Deep Sequencing Reveals Differences in the Transcriptional Landscapes of Fibers from Two Cultivated Species of Cotton. Plos One, v. 7, p. e48855, 2012.
GALANTE, RAFAELA S. ; KOBLITZ, M. G. B. ; PIROVANI, C. P. ; CASCARDO, J. C. M. ; ASSIS, S.A. ; PEREIRA, GONÇALO A.G. ; Taranto, Alex G. ; Góes-Neto, Aristóteles ; KOBLITZ, MARIA G.B. ; CASCARDO, JÚLIO C.M. ; ASSIS, SANDRA A. DE ; Pirovani, Carlos P. ; CRUZ, SANDRA H. . Purification, characterization and structural determination of chitinases produced by Moniliophthora perniciosa. Anais da Academia Brasileira de Ciências (Impresso), v. 84, p. 469-486, 2012.
PINHEIRO, ANTONIO ANDERSON FREITAS ; TARANTO, ALEX GUTTERRES ; DUARTE, ANGELO AMÂNCIO; NETO, ARISTÓTELES GÓES ; DA HORA JÚNIOR, BRAZ TAVARES ; Pereira, Gonçalo Amarante Guimarães ; DOS SANTOS JÚNIOR, MANOELITO COELHO ; DE ASSIS, SANDRA APARECIDA . Homology modeling studies of beta(1,3)-D-glucan synthase of Moniliophthora perniciosa. International Journal of Quantum Chemistry, v. n/a, p. n/a-n/a, 2012.
Rojas, T. C. G. ; PARIZZI, L. P. ; Tiba, M. R. ; Chen, L. ; Pereira, G. A. G. ; Sangal, V. ; Yang, J. ; Yu, J. ; Dias da Silveira, W. . Draft Genome of a Brazilian Avian-Pathogenic Escherichia coli Strain and In Silico Characterization of Virulence-Related Genes. Journal of Bacteriology (Print), v. 194, p. 3023-3023, 2012.
ÁVILA, THIAGO C. ; POPPI, RONEI J. ; LUNARDI, INÊS ; TIZEI, PEDRO A. G. ; Pereira, Gonçalo A. G. . Raman spectroscopy and chemometrics for on-line control of glucose fermentation by Saccharomyces cerevisiae. Biotechnology Progress (Print), v. 28, p. 1598-1604, 2012.
Souza Liberal, Anna Theresa ; CARAZZOLLE, Marcelo Falsarella ; Pereira, Gonçalo Amarante ; Simões, Diogo Ardaillon ; Morais, Marcos Antonio . The yeast Dekkera bruxellensis genome contains two orthologs of the ARO10 gene encoding for phenylpyruvate decarboxylase. World Journal of Microbiology & Biotechnology, v. 28, p. 2473-2478, 2012.
Thomazella, Daniela P. T.; Teixeira, Paulo José P. L. ; Oliveira, Halley C. ; Saviani, Elzira E. ; RINCONES, Johana ; Toni, Isabella M. ; Reis, Osvaldo ; Garcia, Odalys ; MEINHARDT, LYNDEL W. ; Salgado, Ione ; Pereira, Gonçalo A. G. . The hemibiotrophic cacao pathogen Moniliophthora perniciosa depends on a mitochondrial alternative oxidase for biotrophic development. New Phytologist (Print), v. 194, p. 1025-1034, 2012.
COSTA, GUSTAVO G.L. ; CABRERA, ODALYS G. ; TIBURCIO, RICARDO A. ; MEDRANO, FRANCISCO J. ; Carazzolle, Marcelo F. ; THOMAZELLA, DANIELA P.T. ; Schuster, Stephen C. ; Carlson, John E. ; Guiltinan, Mark J. ; BAILEY, BRYAN A. ; Mieczkowski, Piotr ; PEREIRA, GONÇALO A.G. ; MEINHARDT, LYNDEL W. . The mitochondrial genome of Moniliophthora roreri, the frosty pod rot pathogen of cacao. Fungal Biology, v. 116, p. 551-562, 2012.
PEREIRA, J. F. ; ALMEIDA, A. P. M. M. ; Cota, J. ; PAMPHILE, J. A. ; FERREIRA DA SILVA, G. ; DE ARAUJO, E. F. ; GRAMACHO, K. P. ; BROMMONSCHENKEL, S. H. ; Pereira, G. A. G. ; DE QUEIROZ, M. V. . Boto, a class II transposon in Moniliophthora perniciosa, is the first representative of the PIF/Harbinger superfamily in a phytopathogenic fungus. Microbiology (Reading. Online), v. 159, p. 112-125, 2012.
2011
MONDEGO, J. M. C. ; Vidal, R. O. ; CARAZZOLLE, Marcelo Falsarella ; PEREIRA, G.A. G. ; CONSORTIUM, B. C. G. P. . An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora. BMC Plant Biology (Online), v. 11, p. 1471-2229, 2011.
PEREIRA, G.A. G.; Georgi, L. ; Herai, Roberto H. ; Vidal, Ramon ; CARAZZOLLE, Marcelo Falsarella ; Polashock, James ; Vorsa, Nicholi . Cranberry microsatellite marker development from assembled next-generation genomic sequence. Molecular Breeding, v. 1, p. 1-11, 2011.
Franco Cairo, Joao Paulo L.; Leonardo, Flavia C. ; Alvarez, Thabata M. ; Ribeiro, Daniela A. ; Buchli, Fernanda ; Costa-Leonardo, Ana Maria ; Carazzolle, Marcelo F ; COSTA, FF ; Paes Leme, Adriana F ; PEREIRA, GONCALO A. G. ; Squina, Fabio M . Functional characterization and target discovery of glycoside hydrolases from the digestome of the lower termite Coptotermes gestroi. BIOTECHNOL BIOFUELS, v. 4, p. 50, 2011.
Carazzolle, Marcelo F.; Rabello, Fernanda R. ; PEREIRA, GONçALO A. G. ; Souza, Alessandra A. ; Machado, Marcos A. ; MARTINS, NATáLIA F. ; Mehta, Angela ; Amaral, Alexandre M. ; Freitas-Astua, Juliana . Identification of defence-related genes expressed in coffee and citrus during infection by Xylella fastidiosa. European Journal of Plant Pathology, v. 130, p. 529-540, 2011.
DA SILVA, LEONARDO F. ; Pirovani, Carlos P. ; CASCARDO, JúLIO C. M. ; ALVIM, FáTIMA C. ; Mendes, Juliano S. ; DIAS, CRISTIANO V. ; Cidade, Luciana C. ; ARAGãO, FRANCISCO J. L. ; COSTA, MARCIO G. C. ;PEREIRA, GONçALO A. G. . Expression of an Oxalate Decarboxylase Impairs the Necrotic Effect Induced by Nep1-like Protein (NLP) of. Molecular Plant-Microbe Interactions, v. 24, p. 839-848, 2011.
Kulcheski, Franceli R ; Stolf-Moreira, Renata ; Abdelnoor, Ricardo V ; Margis, Rogério ; ALMERãO, MAURÃCIO P ; Barbosa, Joice F ; Nepomuceno, Alexandre L ; Marcelino-Guimarães, Francismar C ; Marcolino, Juliana ; Nascimento, Leandro C ; Molina, Lorrayne G ; Rodrigues, Fabiana A ; PEREIRA, GONçALO AG ; Carazzolle, Marcelo F ; de Oliveira, Luiz FV . Identification of novel soybean microRNAs involved in abiotic and biotic stresses. BMC Genomics, v. 12, p. 307, 2011.
Zaparoli, Gustavo; Barsottini, Mario Ramos de Oliveira ; de Oliveira, Juliana Ferreira ; Dyszy, Fabio ; Teixeira, Paulo José Pereira Lima ; Barau, Joan Grande ; Garcia, Odalys ; Costa-Filho, Antonio José ; Ambrosio, Andre Luis Berteli ; Pereira, Gonçalo Amarante Guimarães ; Dias, Sandra Martha Gomes . The Crystal Structure of Necrosis- and Ethylene-Inducing Protein 2 from the Causal Agent of Cacao?s Witches? Broom Disease Reveals Key Elements for Its Activity. Biochemistry (Easton), v. 50, p. 9901-9910, 2011.
Leonardo, F.C. ; da Cunha, A.F. ; da Silva, M.J. ; Carazzolle, M.F. ; Costa-Leonardo, A.M. ; Costa, F.F. ; Pereira, G.A. . Analysis of the workers head transcriptome of the Asian subterranean termite, Coptotermes gestroi. Bulletin of Entomological Research, v. 101, p. 383-391, 2011.
SANTOS JUNIOR, MANOELITO C. ; GONÇALVES, PRISCILA A. ; Taranto, Alex G. ; KOBLITZ, MARIA G. B. ; Góes-Neto, Aristóteles ; Pirovani, Carlos P. ; CASCARDO, JÚLIO C. M. ; CRUZ, SANDRA H. DA ; ZINGALI, RUSSOLINA B. ; Pereira, Gonçalo A. G. ; DIAS, CRISTIANO V. ; ASSIS, SANDRA A. DE . Purification, characterization and structural determination of UDP-N-acetylglucosamine pyrophosphorylase produced by Moniliophthora perniciosa. Journal of the Brazilian Chemical Society (Impresso), v. 22, p. 1015-1023, 2011.
2010
Argueso, J. L. ; PEREIRA, G.A. G. . Perspective: Indigenous sugarcane yeast strains as ideal biological platforms for the delivery of next generation biorefining technologies. International Sugar Journal, v. 112, p. 86-89, 2010.
VIDAL, R. O. ; MONDEGO, J. M. C. ; Pot, D. ; Ambrosio, A. B. ; ANDRADE, A. C. ; Pereira, L. F. P. ; COLOMBO, C. A. ; VIEIRA, L. G. E. ; Carazzolle, M. F. ; Pereira, G. A. G. . A High-Throughput Data Mining of Single Nucleotide Polymorphisms in Coffea Species Expressed Sequence Tags Suggests Differential Homeologous Gene Expression in the Allotetraploid Coffea arabica. Plant Physiology (Bethesda), v. 154, p. 1053-1066, 2010.
PIROVANI, Carlos Priminho ; Silva Santiago, André ; Santos, Lívia Santana ; MICHELI, Fabienne ; Margis, Rogério ; Silva Gesteira, Abelmon ; ALVIM, Fátima Cerqueira ; Pereira, Gonçalo Amarante Guimarães ; Mattos Cascardo, Júlio Cézar . Theobroma cacao cystatins impair Moniliophthora perniciosa mycelial growth and are involved in postponing cell death symptoms. Planta (Heidelberg, v. 232, p. 1485-1497, 2010.
DECKMANN, Ana Carolina ; Theizen, Thaís Holz ; Medrano, Francisco Javier ; FRANCHINI, Kleber Gomes ; Pereira, Gonçalo Amarante Guimarães . Immediate response of myocardium to pressure overload includes transient regulation of genes associated with mitochondrial bioenergetics and calcium availability. Genetics and Molecular Biology (Impresso), v. 33, p. 12-16, 2010.
1995-2009
RINCONES, Johana ; Zeidler, Ane ; Grassi, Maria Carolina ; Carazzolle, Marcelo ; PEREIRA, G.A. G. . The Golden Bridge for Nature: The New Biology Applied to Bioplastics. Polymer Reviews (Philadelphia), v. 49, p. 85-106, 2009.
Lima, J. O. ; PEREIRA, J. F. ; RINCONES, Johana ; BARAU, J. G. ; Araújo, E. F. ; PEREIRA, G.A. G. ; QUEIROZ, M. V. . The glyceraldehide-3-phosphate dehydrogenase gene of Moniliophthora perniciosa, the causal agent of witches?broom disease of Theobroma cacao. Genetics and Molecular Biology, v. 32, p. 362-366, 2009.
Sinigaglia, Marialva ; Castro, Mauro A.A. ; Echeverrigaray, Sérgio ; Pereira, Gonçalo A.G. ; PEREIRA, G.A. G. ; Mombach, José C.M. . Analysis of expression pathways alterations of Arabidopsis thaliana induced by a Necrosis- and Ethylene-inducing protein. Physica. A (Print), v. 388, p. 4515-4522, 2009.
PIRES, Acássia Benjamim Leal ; Gramacho, Karina P ; Silva, Delmira C ; Goes-Neto, Aristoteles ; Silva, Mylene M ; Muniz-Sobrinho, Jairo S ; Porto, Ricardo F ; Villela-Dias, Cristiano ; Brendel, Martin ; Cascardo, Julio CM ; PEREIRA, G.A. G. . Early development of Moniliophthora perniciosa basidiomata and developmentally regulated genes. BMC Microbiology (Online), v. 9, p. 158, 2009.
CARAZZOLLE, Marcelo Falsarella ; HERIG, T. S. ; DECKMANN, Ana Carolina ; PEREIRA, G.A. G. . -MaPs – DNA-microarray projects: web-based software for multi-platform microarray analysis.. Genetics and Molecular Biology (Impresso), v. 32, p. 632-639, 2009.
Tiburcio, Ricardo Augusto ; Costa, Gustavo Gilson Lacerda ; CARAZZOLLE, Marcelo Falsarella ; Mondego, Jorge Maurício Costa ; Schuster, Stephen C. ; Carlson, John E. ; Guiltinan, Mark J. ; BAILEY, BRYAN A. ; Mieczkowski, Piotr ; Meinhardt, Lyndel W. ; PEREIRA, G. A. G. ; PEREIRA, G.A. G. . Genes Acquired by Horizontal Transfer Are Potentially Involved in the Evolution of Phytopathogenicity in Moniliophthora perniciosa and Moniliophthora roreri, Two of the Major Pathogens of Cacao. Journal of Molecular Evolution, v. 70, p. 85-97, 2009.
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GENU, Victor ; GÖDECKE, Stefanie ; HOLLENBERG, C. P. ; PEREIRA, G.A. G. . The Hansenula polymorpha MOX gene present two alternative transcription start points differentially utilised and sensitive to respiratory activity. European Journal of Biochemistry, v. 270, p. 1-9, 2003.
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